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Published at November 5

Exploring the Potentials and Challenges of Using Large Language Models for the Analysis of Transcriptional Regulation of Long Non-coding RNAs

q-bio.GN

cs.AI

cs.LG

Released Date: November 5, 2024

Authors: Wei Wang¹, Zhichao Hou², Xiaorui Liu², Xinxia Peng³

Aff.: ¹Meta Platform Inc.; ²Department of Computer Science, North Carolina State University, USA; ³Department of Molecular Biomedical Sciences and Bioinformatics Research Center, North Carolina State University, USA

Arxiv: http://arxiv.org/abs/2411.03522v1

Model\Seq. Length	300bp	500bp	1000bp	2000bp
LR	70.45	67.46	65.90	65.32
NT-500M-human	70.10	65.73	51.90	34.26
DNABERT-2	67.78	69.11	46.48	45.73
DNABERT (3-mer)	73.48	67.69	49.72	37.46