notesum.ai

Published at December 10

Graph Neural Networks Are More Than Filters: Revisiting and Benchmarking from A Spectral Perspective

cs.LG

cs.AI

Released Date: December 10, 2024

Authors: Yushun Dong¹, Patrick Soga², Yinhan He², Song Wang², Jundong Li²

Aff.: ¹Florida State University; ²University of Virginia

Arxiv: http://arxiv.org/pdf/2412.07188v1

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Model	Computers	Cora	CS	DBLP	Photo	Physics	Avg. Ranking
APPNP	56.94 $\pm$ 1.08	54.26 $\pm$ 1.80	52.90 $\pm$ 2.16	51.69 $\pm$ 0.40	56.77 $\pm$ 1.51	53.60 $\pm$ 1.38	13.67 $\pm$ 0.75
FA	58.76 $\pm$ 1.42	54.88 $\pm$ 2.82	52.95 $\pm$ 3.79	52.76 $\pm$ 1.10	61.79 $\pm$ 1.78	55.81 $\pm$ 2.33	12.00 $\pm$ 1.41
GIN	55.39 $\pm$ 0.86	60.98 $\pm$ 2.94	57.90 $\pm$ 3.35	58.99 $\pm$ 2.95	60.57 $\pm$ 1.48	59.65 $\pm$ 3.27	10.33 $\pm$ 2.36
SGC	62.07 $\pm$ 2.38	61.09 $\pm$ 3.71	59.25 $\pm$ 4.19	56.36 $\pm$ 1.95	64.98 $\pm$ 2.59	58.87 $\pm$ 3.38	9.50 $\pm$ 1.98
GAT	63.47 $\pm$ 2.50	60.33 $\pm$ 2.26	58.28 $\pm$ 2.09	58.41 $\pm$ 1.67	65.56 $\pm$ 2.59	60.38 $\pm$ 2.10	8.67 $\pm$ 1.89
GPS	60.94 $\pm$ 1.59	58.23 $\pm$ 0.99	59.89 $\pm$ 1.73	58.94 $\pm$ 0.92	63.53 $\pm$ 1.77	62.90 $\pm$ 1.52	8.33 $\pm$ 2.13
GCN	63.42 $\pm$ 2.39	62.17 $\pm$ 4.18	59.82 $\pm$ 4.04	57.21 $\pm$ 2.09	66.20 $\pm$ 2.78	59.49 $\pm$ 3.61	7.67 $\pm$ 2.81
GatedGraph	58.67 $\pm$ 1.22	69.85 $\pm$ 2.74	66.14 $\pm$ 2.93	63.84 $\pm$ 2.56	60.41 $\pm$ 1.13	60.20 $\pm$ 2.86	6.17 $\pm$ 4.60
Transformer	64.83 $\pm$ 1.75	62.89 $\pm$ 1.75	59.43 $\pm$ 1.50	61.86 $\pm$ 1.36	65.86 $\pm$ 1.87	60.93 $\pm$ 1.49	5.50 $\pm$ 2.22
Cheb	63.63 $\pm$ 1.65	60.54 $\pm$ 1.40	60.88 $\pm$ 1.93	61.14 $\pm$ 1.28	65.88 $\pm$ 1.68	62.95 $\pm$ 2.06	5.50 $\pm$ 1.61
1-GNN	56.04 $\pm$ 1.12	68.00 $\pm$ 2.45	66.27 $\pm$ 2.77	64.16 $\pm$ 1.96	58.17 $\pm$ 1.47	65.16 $\pm$ 2.77	5.33 $\pm$ 5.44
GATv2	64.22 $\pm$ 2.46	63.05 $\pm$ 2.21	60.41 $\pm$ 2.12	59.38 $\pm$ 1.92	66.54 $\pm$ 2.73	62.58 $\pm$ 2.12	4.67 $\pm$ 1.49
GCNII	66.57 $\pm$ 2.10	60.54 $\pm$ 2.73	62.91 $\pm$ 2.75	58.13 $\pm$ 3.00	69.03 $\pm$ 2.30	66.55 $\pm$ 2.50	4.50 $\pm$ 4.03
SAGE	64.60 $\pm$ 1.69	63.97 $\pm$ 1.80	63.17 $\pm$ 2.01	62.88 $\pm$ 1.33	66.13 $\pm$ 1.88	64.29 $\pm$ 2.10	3.17 $\pm$ 0.37