notesum.ai
Published at November 28Extracting Information in a Low-resource Setting: Case Study on Bioinformatics Workflows
cs.CL
Released Date: November 28, 2024
Authors: Clémence Sebe1, Sarah Cohen-Boulakia1, Olivier Ferret2, Aurélie Névéol1
Aff.: 1Université Paris-Saclay, LISN, CNRS, Orsay, 91400, France; 2Université Paris-Saclay, CEA, List, F-91120, Palaiseau, France

| Entities | P | R | F1 | Entities | P | R | F1 |
|---|---|---|---|---|---|---|---|
| Biblio | 93.1 | 82.2 | 87.3 | LibraryPackage | 3.8 | 5.6 | 4.5 |
| Container | 29.2 | 50.0 | 36.8 | ManagementSystem | 41.1 | 38.3 | 39.7 |
| Data | 31.2 | 27.6 | 29.3 | Method | 15.4 | 12.1 | 13.6 |
| Database | 28.3 | 24.6 | 26.3 | Parameter | 11.4 | 8.8 | 9.9 |
| Description | 26.2 | 19.4 | 22.3 | ProgrammingLanguage | 23.5 | 14.3 | 17.8 |
| Environment | 60.0 | 13.0 | 21.4 | Tool | 54.9 | 59.1 | 56.9 |
| File | 30.7 | 34.8 | 32.6 | Version | 67.1 | 39.5 | 49.7 |
| Hardware | 20.5 | 26.3 | 23.1 | WorkflowName | 29.1 | 37.7 | 32.8 |
| Overall | 40.1 | 36.7 | 38.3 |