notesum.ai
Published at November 26vesselFM: A Foundation Model for Universal 3D Blood Vessel Segmentation
eess.IV
cs.CV
Released Date: November 26, 2024
Authors: Bastian Wittmann1, Yannick Wattenberg2, Tamaz Amiranashvili3, Suprosanna Shit1, Bjoern Menze1
Aff.: 1University of Zurich; 2ETH Zurich; 3Technical University of Munich

| Task | Model | OCTA [54, 17] | BvEM [51] | SMILE-UHURA [9] | MSD8 [2] | ||||
|---|---|---|---|---|---|---|---|---|---|
| zero-shot | tUbeNet [24] | 36.01 | 23.64 | 10.03 | 11.17 | 48.32 | 36.85 | 5.13 | 5.84 |
| VISTA3D [23] | 13.60 | 3.72 | 0.94 | 2.03 | 5.05 | 1.62 | 23.83 | 20.25 | |
| SAM-Med3D [53] | 6.74 | 6.56 | 5.98 | 7.38 | 2.12 | 1.66 | 7.94 | 7.89 | |
| MedSAM-2 [61] | 28.56 | 15.76 | 10.92 | 12.27 | 3.85 | 5.46 | 14.53 | 14.27 | |
| vesselFM (ours) | 46.94 | 67.07 | 67.49 | 62.04 | 74.66 | 75.27 | 29.69 | 36.14 | |
| one-shot | tUbeNet [24] | 38.09 | 59.37 | 10.75 | 11.53 | 57.67 | 53.25 | 13.66 | 15.41 |
| VISTA3D [23] | 51.24 | 25.69 | 8.25 | 15.04 | 56.53 | 42.42 | 31.73 | 32.94 | |
| SAM-Med3D [53] | 38.33 | 54.90 | 49.47 | 52.14 | 38.57 | 36.94 | 29.29 | 36.78 | |
| MedSAM-2 [61] | 56.68 | 50.95 | 24.07 | 24.69 | 19.78 | 11.87 | 30.21 | 23.89 | |
| vesselFM (from scratch)∗ | 65.57 | 73.79 | 63.85 | 39.55 | 37.99 | 45.72 | 27.13 | 29.48 | |
| vesselFM (ours) | 72.10 | 83.73 | 78.27 | 79.91 | 76.43 | 78.36 | 36.88 | 48.65 | |
| few-shot | tUbeNet [24] | 41.61 | 57.98 | 5.41 | 10.22 | 56.31 | 49.28 | 17.67 | 18.97 |
| VISTA3D [23] | 54.25 | 32.59 | 24.04 | 38.10 | 61.17 | 51.05 | 41.90 | 46.45 | |
| SAM-Med3D [53] | 37.85 | 56.94 | 57.86 | 66.04 | 46.59 | 44.63 | 31.30 | 35.48 | |
| MedSAM-2 [61] | 56.96 | 51.99 | 18.76 | 19.66 | 58.15 | 42.72 | 29.24 | 22.38 | |
| vesselFM (from scratch)∗ | 67.37 | 75.79 | 63.03 | 56.69 | 50.51 | 58.77 | 32.64 | 36.03 | |
| vesselFM (ours) | 75.70 | 84.03 | 78.11 | 84.54 | 78.77 | 79.37 | 45.04 | 57.25 | |
| ∗Model not pre-trained on , , and . | |||||||||